SHAPE-Tools

SHAPE-Tools is a tool set in C++ and Python to calculate icSHAPE/smartSHAPE score. The reconmended pipline is here(genome version) and here(transcriptome version). If you have mapped your reads, you can use batch calculation pipeline here.

2018-07-20 Main Changes
Download SHAPE-Tools Test version Manual First version
2018-08-03
Download SHAPE-Tools 1.0.0 Manual -D1/-D2 to be -D; -N1/-N2 to be -N


Depedence

Installation

  1. Uncompress. tar xvf SHAPE-Tools-Test.tar.gz
  2. Compile. make; make install;





Contact Li Pan if you have any questions about this tool.